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Currently open positions

PhD student – Molecular microbiology of bacterial biofilms

Starting immediately or as per agreement

The Biozentrum of the University of Basel is one of the world’s leading life sciences institutes. With 33 groups and 500 employees, we are a dynamic and international research community that has spawned many fundamental discoveries in biology and medicine as well as several Nobel Laureates. Become part of our community!

The research group of Prof. Knut Drescher at the Biozentrum of the University of Basel seeks to appoint a PhD student in molecular microbiology, with a focus on bacterial biofilms. The position is available immediately or by mutual agreement.

The project

The research group of Knut Drescher (https://drescherlab.org) focuses on understanding the development and emergent properties of bacterial communities (called “biofilms”). Biofilms are antibiotic-tolerant bacterial communities that are the cause of many chronic and acute infections in humans, but biofilms are also a model system for understanding basic aspects of multicellular organization in living systems. Our projects utilize highly controlled laboratory experiments based on microfluidic growth systems for biofilms, and stem-cell-derived organoids and bioengineered tissues for infections. We recently made important discoveries about danger signals that trigger biofilm formation (Nature Microbiology 2025) and emergent behaviors of biofilms (Cell 2023) that are the basis for the PhD project.

The PhD project will investigate new emergent behaviors of biofilm communities that do not occur in isolated bacterial cells. The project will utilize a variety of molecular tools to analyze, manipulate, and perturb biofilms. A particular focus will be on the use of transcriptomics, genetics, and confocal microscopy methods for investigating cellular behaviors in biofilms during biofilm growth and during infections. The exact project is flexible and will be developed together with Knut Drescher, depending on the strengths and interests of the PhD student.

To get an overview of our lab’s recent projects, take a look at our publications: https://drescherlab.org/publications.html

Your profile

We are looking for a highly motivated and talented PhD student to join our lab. Required qualification: A Master's degree with a research thesis in molecular microbiology.

We offer

We offer a fully funded PhD position in a highly interactive, multidisciplinary, and international research group at the Biozentrum. Our group brings together expertise in molecular microbiology, biophysics, as well as bioinformatics and the analysis of large datasets. Additionally, the PhD student will be part of the Swiss NCCR AntiResist consortium, with lots of opportunities for scientific exchange with colleagues in related fields. Moreover, the Biozentrum offers excellent support from various core facilities with expert staff, and a structured PhD program. Our group embraces diversity and equal opportunity. We are committed to building a team that represents a variety of backgrounds, perspectives, and skills.

Basel is an international city with people from over 150 countries, located on the border where Switzerland, Germany, and France meet. Basel is home to numerous biomedical research institutions, offering outstanding opportunities for training, networking, and career development. Basel provides a high standard of living and a rich and varied cultural atmosphere.

Application / Contact

Application deadline: 15 November 2026.

Please note that only applications through the online form will be accepted.

For any informal enquiries, please contact: knut.drescher@unibas.ch
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New Approaches to Combat Antibiotic-Resistant Bacteria - 3rd Edition - Pre-registration and abstract submission

Description

Scientific Organizers

Christoph Dehio, Maximiliano Gutierrez, Deborah Hung, Tanja Schneider

Date

June 9-13, 2024

Location

Ascona, Switzerland

Summary of the meeting

Over the past decades, pan-resistant strains of major bacterial pathogens have emerged rendering available antibiotics ineffective and putting at risk many achievements of modern medicine. New ways to identify clinically effective antimicrobials are urgently needed. However, the current antimicrobial development pipeline is inadequate because of high attrition and limited coverage of multi-drug resistant Gram-negative bacteria.

This conference aligns with the scope of the National Center of Competence in Research “AntiResist” which aims at revitalizing antibiotic discovery by bringing a patient-centered paradigm shift. Such a shift requires a multidisciplinary approach starting at the bedside. Many factors affect the development of novel antibiotics such as our limited understanding of the physiology and heterogeneity of bacterial pathogens in patients and their interactions with microbiota. Bacteria growing in patients experience environments that are very different from standard laboratory conditions traditionally used for antibacterial discovery.

This conference will review the current knowledge of:

- Clinical relevance of antibiotic resilience

- Axenic model systems and single cell technologies

- Complex tissue model systems

- Drug penetrance and action through scale

- New approaches in antibiotic discovery and development

- Non-traditional antibacterials

It will introduce students to emerging concepts that promise to accelerate antibacterial discovery, improve treatment regimens and uncover novel targets for eradicating pathogens.

It will bring together world-leading clinicians, microbiologists, tissue engineers and chemists who share common interests in the field and work towards the development of urgently needed control strategies to win the race against superbugs.

Contact

For more information visit the conference website. For specific questions regarding the registration or financial assistance, contact info@nccr-antiresist.ch

Apply now